How to draw a reaction scheme with reagents and conditions

Tutorial · macOS and Windows

A good scheme shows reactants, products and conditions clearly aligned. ChemPencil has reaction arrows with reagent and condition text, plus and equals signs, curved arrows for mechanisms, and alignment commands to line everything up.

Lay out the scheme

  1. Draw or insert the reactants and products in a row. Double-clicking a template in Window › Show Templates (Mac) or View › Templates (Windows) adds common molecules quickly.
  2. Pick the reaction arrow tool and drag from where the arrow should start to where it should end. A plain click drops a horizontal arrow about three bonds long.
  3. Add plus signs with Structure › Insert “+” Sign (on Windows, in Structure › Reactions), and drag them into place.
  4. Select everything and use Structure › Align & Distribute to centre the row vertically and space it evenly.
The arrow tools: forward, equilibrium and retrosynthesis arrows, curved arrows and brackets
Arrow tools: hold a button to pick another style.

Add reagents and conditions

  1. Choose Structure › Edit Reaction Conditions… (⌥⌘R on Mac, Ctrl+Shift+R on Windows).
  2. Type the reagents for above the arrow, for example H₂SO₄ (cat.), and the conditions for below it, for example reflux, 2 h.
  3. Click OK. The text goes on the most recently drawn arrow; leave a field empty to clear it.
A reaction arrow with H2SO4 (cat.) above and reflux, 2 h below
Reagents above the arrow, conditions below.

Other arrows

Once the scheme is drawn, ChemPencil can work out the stoichiometry and yield for it, and Structure › Map Reaction numbers the matching atoms on both sides.

Try it yourself. ChemPencil runs on macOS 12 and later and on Windows 10 and 11.